decoy database

Now consider that we want to compute p-values for our collection of 34 499 ranked PSMs. A commonly used model of the null hypothesis is to search the original set of spectra against a decoy database. A decoy database is a database of amino acid sequences

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  • Now consider that we want to compute p-values for our collection of 34 499 ranked PSMs. A ...
    ... Identified by Tandem Mass Spectrometry Using Decoy Datab ...
    http://genomics.princeton.edu
  • dicted mass spectra of candidate peptides in the database, the pep- tides are scored and ....
    A theoretical foundation of the target-decoy search strategy for ... - arXiv
    https://arxiv.org
  • An easy-to-use Decoy Database Builder software tool, implementing different decoy strategi...
    An easy-to-use Decoy Database Builder ... - Wiley Online Library
    http://onlinelibrary.wiley.com
  • An easy-to-use Decoy Database Builder software tool, implementing different decoy strategi...
    An easy-to-use Decoy Database Builder software tool, implementing ...
    https://www.ncbi.nlm.nih.gov
  • The GDD, a GPCR Decoy Database, with its accompanying GPCR Ligand Library (GLL) have been ...
    Cavasotto Lab - Databases
    http://cavasotto-lab.net
  • Decoy Database Builder Introduction to the use of the Decoy Database Builder The false pos...
    Decoy Database Builder - Homepages
    http://homepage.ruhr-uni-bochu
  • Create a decoy peptide database from standard FASTA databases. Decoy databases are useful ...
    DecoyDatabase
    http://ftp.mi.fu-berlin.de
  • This allows you to specify your target database plus a contaminant file and obtain a conca...
    DecoyDatabase - Freie Universität
    http://ftp.mi.fu-berlin.de
  • DecoyPYrat - Fast Hybrid Decoy Sequence Database Creation for Proteomic Mass Spectromtery ...
    DecoyPYrat | Sanger Institute
    http://www.sanger.ac.uk
  • This tutorial provides an in-depth look at why and how PEAKS decoy fusion false ... the so...
    False Discovery Rate (FDR) Tutorial - Protein Identification - BSI
    http://www.bioinfor.com
  • Amino acid motif that separates the decoy sequence from the target one. This setting shoul...
    fasta - manipulations with FASTA databases — Pyteomics ...
    http://pythonhosted.org
  • A G protein-coupled receptor (GPCR) ligand library (GLL) for 147 targets, selecting for ea...
    GDD (GPCR Decoy Database) | GPCR-ligand interaction data - ...
    https://omictools.com
  • Decoy databases Introduction Many journals impose guidelines for the reporting of database...
    Mascot database search: target-decoy searches
    http://www.matrixscience.com
  • You do not expect to get any true matches from the "decoy" database. So, the num...
    Mascot database search: target-decoy searches - Matrix Science
    http://www.matrixscience.com
  • Decoy Databases Introduction Recently, there have been calls for greater stringency in the...
    Matrix Science - Help - Decoy Databases
    http://zeratul.lj.ad.scripps.e
  • Decoy Databases Introduction Recently, there have been calls for greater stringency in the...
    Matrix Science - Help - Decoy Databases - Edwards Lab - ...
    https://edwardslab.bmcb.george
  • The 'Search Decoy Database' option is SearchGUI I assume turns this on. As such, I...
    MS-GF+ import settings with a decoy database - Google Groups ...
    https://groups.google.com
  • Keywords: Proteomics, Target-decoy, False positive, False discovery, Mass .... For reverse...
    Target-Decoy Search Strategy for Mass Spectrometry-Based Proteomics
    https://www.ncbi.nlm.nih.gov
  • 2010年7月22日 - dbEST ( nucleic acid database). MASCOT提供使用者自建database比對的功能,方便使用者進行 .... 以這張結...
    [PDF] MASCOT介紹與蛋白質鑑定的實際應用
    http://juang.bst.ntu.edu.tw
  • 2009年7月23日 - Database search. Current Opinion in ... Database search. Edman Degradation ....
    [PDF] 蛋白質資料庫搜尋鑑定(Mascot)
    http://juang.bst.ntu.edu.tw